FAQs

PanOmiQ identifies deletions, duplications, insertions, inversions, and translocations using advanced algorithms optimized for both short- and long-read data.

PanOmiQ supports VCFs from Illumina, PacBio HiFi, Oxford Nanopore, and Complete Genomics. It can also process multisample VCFs for cohort-level analysis.

Yes. PanOmiQ includes an integrated Genomic Viewer for visualizing structural variants, SNPs, CNVs, and INDELs across genomic coordinates with gene annotation overlays.

PanOmiQ uses AI-driven scoring models and phenotype-based filters to prioritize clinically significant variants, integrating ACMG guidelines and population frequency data.

Yes. Users can design customized panels for disease-specific, population-specific, or gene-targeted studies configurable directly within PanOmiQ.

Currently, PanOmiQ serves as a unified platform capable of analyzing genomics, transcriptomics, and microbiomics independently within one interface, with future cross-omics integration planned.

PanOmiQ uses blockchain-backed data traceability, AES-256 encryption, and two-factor authentication (2FA) for user access and secure data transactions.

Data is processed on ISO 27001 and HIPAA-compliant servers. Local deployment on hardware or private cloud hosting options are available for clients in regions with strict data residency laws.

PanOmiQ adheres to GDPR, DHA, and local data protection laws across the Middle East, ensuring full transparency and logs for clinical users.

Yes. PanOmiQ supports direct upload of FASTQ files and performs end-to-end analysis from alignment and variant calling to annotation and visualization.

Users can download VCF, gVCF, annotated TSV, BAM/CRAM, and QC reports. Structural variant reports are also exportable in BED or VCF format (In pipeline, not yet created).

Yes. PanOmiQ supports multisample and cohort-level variant calling and statistical analysis for population and ancestry-based projects.

Yes. The RNA-Seq module provides expression quantification, differential expression analysis, and fusion gene detection.

Using optimized parallel pipelines, PanOmiQ can process a 30x WGS dataset in under 30 minutes, depending on hardware configuration on premises.

Yes. The interface supports Arabic, English, Spanish, German and French, with regional date/time and lab unit preferences configurable per account.

PanOmiQ integrates seamlessly with LIMS, EMR, and data warehouse systems via secure APIs for automated workflow management.

PanOmiQ enables genome-scale analytics with regional customization, supporting local allele frequency databases and secure, compliant edge deployments on FPGA chip.